Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tram1Q91V04 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tram1Q91V04 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.63■□□□□ 0.25
Tram1Q91V04 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.63■□□□□ 0.25
Tram1Q91V04 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.63■□□□□ 0.25
Tram1Q91V04 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Tram1Q91V04 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tram1Q91V04 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Tram1Q91V04 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Tram1Q91V04 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tram1Q91V04 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Tram1Q91V04 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tram1Q91V04 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tram1Q91V04 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Tram1Q91V04 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tram1Q91V04 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tram1Q91V04 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tram1Q91V04 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tram1Q91V04 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.61■□□□□ 0.25
Tram1Q91V04 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tram1Q91V04 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tram1Q91V04 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Tram1Q91V04 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tram1Q91V04 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tram1Q91V04 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.6■□□□□ 0.25
Tram1Q91V04 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tram1Q91V04 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.6■□□□□ 0.25
Tram1Q91V04 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tram1Q91V04 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.6■□□□□ 0.25
Tram1Q91V04 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tram1Q91V04 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.6■□□□□ 0.25
Tram1Q91V04 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tram1Q91V04 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tram1Q91V04 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tram1Q91V04 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.59■□□□□ 0.25
Tram1Q91V04 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.59■□□□□ 0.25
Tram1Q91V04 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.59■□□□□ 0.25
Tram1Q91V04 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Tram1Q91V04 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.59■□□□□ 0.25
Tram1Q91V04 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 BC021767-201ENSMUST00000126387 1716 ntBASIC16.59■□□□□ 0.25
Tram1Q91V04 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tram1Q91V04 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tram1Q91V04 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tram1Q91V04 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.58■□□□□ 0.24
Tram1Q91V04 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tram1Q91V04 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tram1Q91V04 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tram1Q91V04 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Tram1Q91V04 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tram1Q91V04 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tram1Q91V04 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tram1Q91V04 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Tram1Q91V04 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms