Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp25Q8VIK1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Snrnp25Q8VIK1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp25Q8VIK1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Snrnp25Q8VIK1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp25Q8VIK1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Snrnp25Q8VIK1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp25Q8VIK1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.35■□□□□ 0.85
Snrnp25Q8VIK1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp25Q8VIK1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp25Q8VIK1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp25Q8VIK1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp25Q8VIK1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp25Q8VIK1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Snrnp25Q8VIK1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Snrnp25Q8VIK1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snrnp25Q8VIK1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snrnp25Q8VIK1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Snrnp25Q8VIK1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp25Q8VIK1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp25Q8VIK1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Snrnp25Q8VIK1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.3■□□□□ 0.84
Snrnp25Q8VIK1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp25Q8VIK1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp25Q8VIK1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snrnp25Q8VIK1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snrnp25Q8VIK1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms