Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cspg4Q8VHY0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
Cspg4Q8VHY0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cspg4Q8VHY0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Cspg4Q8VHY0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Gm25925-201ENSMUST00000158314 306 ntBASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.73■□□□□ 0.27
Cspg4Q8VHY0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cspg4Q8VHY0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cspg4Q8VHY0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cspg4Q8VHY0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Gm11249-201ENSMUST00000117071 859 ntBASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Gm6433-201ENSMUST00000118634 875 ntBASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cspg4Q8VHY0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cspg4Q8VHY0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Gm27275-201ENSMUST00000184318 272 ntBASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms