Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Swsap1Q8VCI7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Swsap1Q8VCI7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Swsap1Q8VCI7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Swsap1Q8VCI7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Swsap1Q8VCI7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Swsap1Q8VCI7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Swsap1Q8VCI7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Swsap1Q8VCI7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Swsap1Q8VCI7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Swsap1Q8VCI7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.39■□□□□ 0.38
Swsap1Q8VCI7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Swsap1Q8VCI7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Gm26833-201ENSMUST00000180899 440 ntBASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Swsap1Q8VCI7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Swsap1Q8VCI7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Swsap1Q8VCI7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Swsap1Q8VCI7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.36■□□□□ 0.37
Swsap1Q8VCI7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Swsap1Q8VCI7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Swsap1Q8VCI7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Swsap1Q8VCI7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms