Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Gm10033-202ENSMUST00000211874 928 ntBASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ndc1Q8VCB1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndc1Q8VCB1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.22■□□□□ 0.51
Ndc1Q8VCB1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Gm27801-201ENSMUST00000184174 223 ntBASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 AV356131-201ENSMUST00000206201 750 ntBASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ndc1Q8VCB1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ndc1Q8VCB1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ndc1Q8VCB1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.2■□□□□ 0.5
Ndc1Q8VCB1 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.2■□□□□ 0.5
Ndc1Q8VCB1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.2■□□□□ 0.5
Ndc1Q8VCB1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ndc1Q8VCB1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ndc1Q8VCB1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndc1Q8VCB1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ndc1Q8VCB1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndc1Q8VCB1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms