Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chrna3Q8R4G9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chrna3Q8R4G9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chrna3Q8R4G9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chrna3Q8R4G9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chrna3Q8R4G9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chrna3Q8R4G9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chrna3Q8R4G9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chrna3Q8R4G9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Gm9988-201ENSMUST00000069786 435 ntBASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chrna3Q8R4G9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chrna3Q8R4G9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chrna3Q8R4G9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chrna3Q8R4G9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Chrna3Q8R4G9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chrna3Q8R4G9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna3Q8R4G9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna3Q8R4G9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna3Q8R4G9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chrna3Q8R4G9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms