Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Ccdc59Q8R2N0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc59Q8R2N0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc59Q8R2N0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc59Q8R2N0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ccdc59Q8R2N0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc59Q8R2N0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc59Q8R2N0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Gm9847-201ENSMUST00000052528 599 ntBASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc59Q8R2N0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc59Q8R2N0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Gm12922-201ENSMUST00000120626 809 ntBASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.23■□□□□ 0.51
Ccdc59Q8R2N0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc59Q8R2N0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc59Q8R2N0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.5
Ccdc59Q8R2N0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc59Q8R2N0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc59Q8R2N0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc59Q8R2N0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc59Q8R2N0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms