Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.86■□□□□ 0.93
Vopp1Q8R1C3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vopp1Q8R1C3 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.86■□□□□ 0.93
Vopp1Q8R1C3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vopp1Q8R1C3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Vopp1Q8R1C3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vopp1Q8R1C3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Gm4968-201ENSMUST00000071458 858 ntBASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vopp1Q8R1C3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Nespas-201ENSMUST00000143738 1083 ntBASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vopp1Q8R1C3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.83■□□□□ 0.93
Vopp1Q8R1C3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Vopp1Q8R1C3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vopp1Q8R1C3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vopp1Q8R1C3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vopp1Q8R1C3 Mir5133-201ENSMUST00000174955 77 ntBASIC20.81■□□□□ 0.92
Vopp1Q8R1C3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vopp1Q8R1C3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vopp1Q8R1C3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vopp1Q8R1C3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.81■□□□□ 0.92
Vopp1Q8R1C3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Gm12527-201ENSMUST00000117967 564 ntBASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vopp1Q8R1C3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Gm6365-201ENSMUST00000054711 744 ntBASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vopp1Q8R1C3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Gm12441-201ENSMUST00000121806 588 ntBASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Vopp1Q8R1C3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Vopp1Q8R1C3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vopp1Q8R1C3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Vopp1Q8R1C3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms