Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl47Q8K2Y7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl47Q8K2Y7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrpl47Q8K2Y7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.15■□□□□ 0.66
Mrpl47Q8K2Y7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Mrpl47Q8K2Y7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mrpl47Q8K2Y7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mrpl47Q8K2Y7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mrpl47Q8K2Y7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrpl47Q8K2Y7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrpl47Q8K2Y7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mrpl47Q8K2Y7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms