Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim68Q8K243 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim68Q8K243 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim68Q8K243 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim68Q8K243 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim68Q8K243 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim68Q8K243 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim68Q8K243 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim68Q8K243 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim68Q8K243 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim68Q8K243 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim68Q8K243 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.92■□□□□ 0.94
Trim68Q8K243 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim68Q8K243 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim68Q8K243 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim68Q8K243 Gm12441-201ENSMUST00000121806 588 ntBASIC20.92■□□□□ 0.94
Trim68Q8K243 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.92■□□□□ 0.94
Trim68Q8K243 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim68Q8K243 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.92■□□□□ 0.94
Trim68Q8K243 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim68Q8K243 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim68Q8K243 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim68Q8K243 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.91■□□□□ 0.94
Trim68Q8K243 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim68Q8K243 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Trim68Q8K243 Gm7514-201ENSMUST00000209475 934 ntBASIC20.91■□□□□ 0.94
Trim68Q8K243 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.91■□□□□ 0.94
Trim68Q8K243 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim68Q8K243 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim68Q8K243 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim68Q8K243 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim68Q8K243 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim68Q8K243 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim68Q8K243 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim68Q8K243 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim68Q8K243 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trim68Q8K243 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim68Q8K243 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim68Q8K243 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim68Q8K243 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim68Q8K243 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Trim68Q8K243 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim68Q8K243 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.88■□□□□ 0.93
Trim68Q8K243 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim68Q8K243 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.88■□□□□ 0.93
Trim68Q8K243 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim68Q8K243 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim68Q8K243 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim68Q8K243 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim68Q8K243 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim68Q8K243 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim68Q8K243 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Trim68Q8K243 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.87■□□□□ 0.93
Trim68Q8K243 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.87■□□□□ 0.93
Trim68Q8K243 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim68Q8K243 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim68Q8K243 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim68Q8K243 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim68Q8K243 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim68Q8K243 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim68Q8K243 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Trim68Q8K243 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim68Q8K243 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim68Q8K243 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.86■□□□□ 0.93
Trim68Q8K243 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim68Q8K243 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim68Q8K243 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim68Q8K243 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms