Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.77■□□□□ 0.6
Nckap1lQ8K1X4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1lQ8K1X4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1lQ8K1X4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.77■□□□□ 0.6
Nckap1lQ8K1X4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1lQ8K1X4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1lQ8K1X4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nckap1lQ8K1X4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nckap1lQ8K1X4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Nckap1lQ8K1X4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nckap1lQ8K1X4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nckap1lQ8K1X4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nckap1lQ8K1X4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nckap1lQ8K1X4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Nckap1lQ8K1X4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.73■□□□□ 0.59
Nckap1lQ8K1X4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1lQ8K1X4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1lQ8K1X4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nckap1lQ8K1X4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nckap1lQ8K1X4 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Gm13241-201ENSMUST00000094493 780 ntBASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1lQ8K1X4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1lQ8K1X4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1lQ8K1X4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Nckap1lQ8K1X4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1lQ8K1X4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1lQ8K1X4 Gm21956-201ENSMUST00000179946 522 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms