Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot3Q8K0V4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot3Q8K0V4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot3Q8K0V4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Gm43566-201ENSMUST00000196851 808 ntBASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot3Q8K0V4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cnot3Q8K0V4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot3Q8K0V4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Gm10232-201ENSMUST00000089221 720 ntBASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot3Q8K0V4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot3Q8K0V4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot3Q8K0V4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms