Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.39■■□□□ 1.17
Rtn1Q8K0T0 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.39■■□□□ 1.17
Rtn1Q8K0T0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rtn1Q8K0T0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Rtn1Q8K0T0 Golph3-202ENSMUST00000226517 2359 ntBASIC22.39■■□□□ 1.17
Rtn1Q8K0T0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rtn1Q8K0T0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rtn1Q8K0T0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rtn1Q8K0T0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rtn1Q8K0T0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 Gm43060-201ENSMUST00000200621 289 ntBASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rtn1Q8K0T0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtn1Q8K0T0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtn1Q8K0T0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtn1Q8K0T0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rtn1Q8K0T0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.33■■□□□ 1.17
Rtn1Q8K0T0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.33■■□□□ 1.17
Rtn1Q8K0T0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rtn1Q8K0T0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rtn1Q8K0T0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rtn1Q8K0T0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rtn1Q8K0T0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Gm27801-201ENSMUST00000184174 223 ntBASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Rtn1Q8K0T0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rtn1Q8K0T0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms