Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgcs1Q8JZK9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgcs1Q8JZK9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgcs1Q8JZK9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hmgcs1Q8JZK9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgcs1Q8JZK9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Hmgcs1Q8JZK9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgcs1Q8JZK9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgcs1Q8JZK9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgcs1Q8JZK9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgcs1Q8JZK9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.39■□□□□ 0.53
Hmgcs1Q8JZK9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgcs1Q8JZK9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgcs1Q8JZK9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgcs1Q8JZK9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgcs1Q8JZK9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms