Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Trpm6Q8CIR4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trpm6Q8CIR4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trpm6Q8CIR4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.56■□□□□ 0.72
Trpm6Q8CIR4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Trpm6Q8CIR4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trpm6Q8CIR4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpm6Q8CIR4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpm6Q8CIR4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpm6Q8CIR4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpm6Q8CIR4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trpm6Q8CIR4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trpm6Q8CIR4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trpm6Q8CIR4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpm6Q8CIR4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpm6Q8CIR4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpm6Q8CIR4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trpm6Q8CIR4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trpm6Q8CIR4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trpm6Q8CIR4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Gm10653-202ENSMUST00000139570 835 ntBASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.51■□□□□ 0.71
Trpm6Q8CIR4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Gm5408-201ENSMUST00000197998 747 ntBASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm6Q8CIR4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm6Q8CIR4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm6Q8CIR4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Gm12527-201ENSMUST00000117967 564 ntBASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Gm26524-201ENSMUST00000192339 390 ntBASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm6Q8CIR4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms