Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim5Q8CI51 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim5Q8CI51 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim5Q8CI51 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Gm9847-201ENSMUST00000052528 599 ntBASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim5Q8CI51 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim5Q8CI51 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim5Q8CI51 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pdlim5Q8CI51 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim5Q8CI51 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim5Q8CI51 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.77■□□□□ 0.44
Pdlim5Q8CI51 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.77■□□□□ 0.44
Pdlim5Q8CI51 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim5Q8CI51 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim5Q8CI51 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pdlim5Q8CI51 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim5Q8CI51 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdlim5Q8CI51 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pdlim5Q8CI51 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pdlim5Q8CI51 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pdlim5Q8CI51 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pdlim5Q8CI51 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms