Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rftn2Q8CHX7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rftn2Q8CHX7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rftn2Q8CHX7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rftn2Q8CHX7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rftn2Q8CHX7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rftn2Q8CHX7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Gm38205-201ENSMUST00000192243 258 ntBASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rftn2Q8CHX7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Gm7514-201ENSMUST00000209475 934 ntBASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rftn2Q8CHX7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rftn2Q8CHX7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.64■□□□□ 0.9
Rftn2Q8CHX7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rftn2Q8CHX7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rftn2Q8CHX7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rftn2Q8CHX7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Gm7860-201ENSMUST00000121190 879 ntBASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rftn2Q8CHX7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rftn2Q8CHX7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Rftn2Q8CHX7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.61■□□□□ 0.89
Rftn2Q8CHX7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rftn2Q8CHX7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rftn2Q8CHX7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rftn2Q8CHX7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rftn2Q8CHX7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rftn2Q8CHX7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rftn2Q8CHX7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.6■□□□□ 0.89
Rftn2Q8CHX7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.6■□□□□ 0.89
Rftn2Q8CHX7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Gm12933-201ENSMUST00000120203 872 ntBASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rftn2Q8CHX7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rftn2Q8CHX7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms