Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc4Q8CG47 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Gm37179-201ENSMUST00000194862 823 ntBASIC23.93■■□□□ 1.42
Smc4Q8CG47 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc4Q8CG47 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc4Q8CG47 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc4Q8CG47 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Smc4Q8CG47 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Smc4Q8CG47 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc4Q8CG47 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc4Q8CG47 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smc4Q8CG47 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Smc4Q8CG47 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc4Q8CG47 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc4Q8CG47 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc4Q8CG47 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Smc4Q8CG47 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.9■■□□□ 1.42
Smc4Q8CG47 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
Smc4Q8CG47 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smc4Q8CG47 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Smc4Q8CG47 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smc4Q8CG47 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Smc4Q8CG47 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smc4Q8CG47 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smc4Q8CG47 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smc4Q8CG47 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.89■■□□□ 1.41
Smc4Q8CG47 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.89■■□□□ 1.41
Smc4Q8CG47 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Smc4Q8CG47 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc4Q8CG47 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Smc4Q8CG47 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Smc4Q8CG47 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Smc4Q8CG47 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc4Q8CG47 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Smc4Q8CG47 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Smc4Q8CG47 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc4Q8CG47 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Smc4Q8CG47 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.87■■□□□ 1.41
Smc4Q8CG47 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.87■■□□□ 1.41
Smc4Q8CG47 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.87■■□□□ 1.41
Smc4Q8CG47 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Smc4Q8CG47 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
Smc4Q8CG47 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Gm7514-201ENSMUST00000209475 934 ntBASIC23.86■■□□□ 1.41
Smc4Q8CG47 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smc4Q8CG47 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc4Q8CG47 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.85■■□□□ 1.41
Smc4Q8CG47 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc4Q8CG47 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc4Q8CG47 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.84■■□□□ 1.41
Smc4Q8CG47 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc4Q8CG47 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
Smc4Q8CG47 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc4Q8CG47 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc4Q8CG47 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.83■■□□□ 1.41
Smc4Q8CG47 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.83■■□□□ 1.41
Smc4Q8CG47 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.83■■□□□ 1.41
Smc4Q8CG47 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc4Q8CG47 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.83■■□□□ 1.41
Smc4Q8CG47 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc4Q8CG47 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms