Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rsph6aQ8CDR2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rsph6aQ8CDR2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rsph6aQ8CDR2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rsph6aQ8CDR2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC25.4■■□□□ 1.66
Rsph6aQ8CDR2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rsph6aQ8CDR2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rsph6aQ8CDR2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Rsph6aQ8CDR2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rsph6aQ8CDR2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rsph6aQ8CDR2 Gm7860-201ENSMUST00000121190 879 ntBASIC25.39■■□□□ 1.66
Rsph6aQ8CDR2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC25.39■■□□□ 1.66
Rsph6aQ8CDR2 Gm10602-201ENSMUST00000098239 609 ntBASIC25.39■■□□□ 1.66
Rsph6aQ8CDR2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rsph6aQ8CDR2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rsph6aQ8CDR2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
Rsph6aQ8CDR2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC25.38■■□□□ 1.65
Rsph6aQ8CDR2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rsph6aQ8CDR2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rsph6aQ8CDR2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Rsph6aQ8CDR2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rsph6aQ8CDR2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC25.36■■□□□ 1.65
Rsph6aQ8CDR2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
Rsph6aQ8CDR2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rsph6aQ8CDR2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
Rsph6aQ8CDR2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rsph6aQ8CDR2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rsph6aQ8CDR2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rsph6aQ8CDR2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rsph6aQ8CDR2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rsph6aQ8CDR2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rsph6aQ8CDR2 Gm10655-201ENSMUST00000098658 1397 ntBASIC25.34■■□□□ 1.65
Rsph6aQ8CDR2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rsph6aQ8CDR2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rsph6aQ8CDR2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
Rsph6aQ8CDR2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC25.33■■□□□ 1.65
Rsph6aQ8CDR2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC25.33■■□□□ 1.65
Rsph6aQ8CDR2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rsph6aQ8CDR2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rsph6aQ8CDR2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rsph6aQ8CDR2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Rsph6aQ8CDR2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
Rsph6aQ8CDR2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Gm6420-201ENSMUST00000193885 723 ntBASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rsph6aQ8CDR2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Rsph6aQ8CDR2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rsph6aQ8CDR2 Gm27011-201ENSMUST00000182352 972 ntBASIC25.3■■□□□ 1.64
Rsph6aQ8CDR2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rsph6aQ8CDR2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Nespas-201ENSMUST00000143738 1083 ntBASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Gm32699-201ENSMUST00000221728 1988 ntBASIC25.29■■□□□ 1.64
Rsph6aQ8CDR2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rsph6aQ8CDR2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rsph6aQ8CDR2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rsph6aQ8CDR2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms