Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 AV356131-201ENSMUST00000206201 750 ntBASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Notumos-201ENSMUST00000151998 2659 ntBASIC21.22■□□□□ 0.99
Prpf31Q8CCF0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 Gm13234-201ENSMUST00000120010 747 ntBASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf31Q8CCF0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf31Q8CCF0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf31Q8CCF0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf31Q8CCF0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prpf31Q8CCF0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf31Q8CCF0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf31Q8CCF0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf31Q8CCF0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf31Q8CCF0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.16■□□□□ 0.98
Prpf31Q8CCF0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Prpf31Q8CCF0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prpf31Q8CCF0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.15■□□□□ 0.98
Prpf31Q8CCF0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf31Q8CCF0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prpf31Q8CCF0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.14■□□□□ 0.97
Prpf31Q8CCF0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf31Q8CCF0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Prpf31Q8CCF0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf31Q8CCF0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prpf31Q8CCF0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.13■□□□□ 0.97
Prpf31Q8CCF0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf31Q8CCF0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.12■□□□□ 0.97
Prpf31Q8CCF0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf31Q8CCF0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Prpf31Q8CCF0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms