Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.72■■□□□ 1.23
Shisa4Q8CA71 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Gm27011-201ENSMUST00000182352 972 ntBASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.71■■□□□ 1.23
Shisa4Q8CA71 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Gm27405-201ENSMUST00000184201 112 ntBASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Shisa4Q8CA71 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Shisa4Q8CA71 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shisa4Q8CA71 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
Shisa4Q8CA71 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Shisa4Q8CA71 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Shisa4Q8CA71 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shisa4Q8CA71 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Shisa4Q8CA71 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Shisa4Q8CA71 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.68■■□□□ 1.22
Shisa4Q8CA71 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Shisa4Q8CA71 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shisa4Q8CA71 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Shisa4Q8CA71 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shisa4Q8CA71 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shisa4Q8CA71 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shisa4Q8CA71 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Gm10493-201ENSMUST00000097270 612 ntBASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shisa4Q8CA71 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.66■■□□□ 1.22
Shisa4Q8CA71 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.66■■□□□ 1.22
Shisa4Q8CA71 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.66■■□□□ 1.22
Shisa4Q8CA71 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shisa4Q8CA71 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.66■■□□□ 1.22
Shisa4Q8CA71 Gm26571-201ENSMUST00000181399 666 ntBASIC22.66■■□□□ 1.22
Shisa4Q8CA71 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shisa4Q8CA71 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shisa4Q8CA71 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Shisa4Q8CA71 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shisa4Q8CA71 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shisa4Q8CA71 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.65■■□□□ 1.22
Shisa4Q8CA71 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Shisa4Q8CA71 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Shisa4Q8CA71 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shisa4Q8CA71 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Shisa4Q8CA71 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shisa4Q8CA71 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.64■■□□□ 1.21
Shisa4Q8CA71 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shisa4Q8CA71 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shisa4Q8CA71 Reep4-203ENSMUST00000226563 1444 ntBASIC22.64■■□□□ 1.21
Shisa4Q8CA71 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shisa4Q8CA71 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Shisa4Q8CA71 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms