Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Gm12821-201ENSMUST00000120022 600 ntBASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm9949Q8C9F4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Gm43173-201ENSMUST00000202246 593 ntBASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm9949Q8C9F4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm9949Q8C9F4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm9949Q8C9F4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm9949Q8C9F4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Gm9949Q8C9F4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm9949Q8C9F4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Gm8493-201ENSMUST00000196881 489 ntBASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm9949Q8C9F4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm9949Q8C9F4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Gm6139-201ENSMUST00000079261 882 ntBASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm9949Q8C9F4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm9949Q8C9F4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms