Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap54Q8C6S9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap54Q8C6S9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap54Q8C6S9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap54Q8C6S9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap54Q8C6S9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.82■□□□□ 0.6
Cfap54Q8C6S9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.82■□□□□ 0.6
Cfap54Q8C6S9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap54Q8C6S9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap54Q8C6S9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap54Q8C6S9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap54Q8C6S9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap54Q8C6S9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 Gm5643-201ENSMUST00000117081 966 ntBASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap54Q8C6S9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cfap54Q8C6S9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cfap54Q8C6S9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap54Q8C6S9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cfap54Q8C6S9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms