Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.2■□□□□ 0.5
Ska3Q8C263 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.2■□□□□ 0.5
Ska3Q8C263 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.2■□□□□ 0.5
Ska3Q8C263 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ska3Q8C263 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ska3Q8C263 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ska3Q8C263 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Ska3Q8C263 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ska3Q8C263 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.19■□□□□ 0.5
Ska3Q8C263 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ska3Q8C263 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ska3Q8C263 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ska3Q8C263 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ska3Q8C263 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ska3Q8C263 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ska3Q8C263 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ska3Q8C263 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.18■□□□□ 0.5
Ska3Q8C263 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ska3Q8C263 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.18■□□□□ 0.5
Ska3Q8C263 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ska3Q8C263 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ska3Q8C263 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ska3Q8C263 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ska3Q8C263 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ska3Q8C263 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ska3Q8C263 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.17■□□□□ 0.5
Ska3Q8C263 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ska3Q8C263 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.17■□□□□ 0.5
Ska3Q8C263 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ska3Q8C263 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ska3Q8C263 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ska3Q8C263 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.17■□□□□ 0.5
Ska3Q8C263 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ska3Q8C263 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.16■□□□□ 0.5
Ska3Q8C263 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.16■□□□□ 0.5
Ska3Q8C263 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.16■□□□□ 0.5
Ska3Q8C263 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ska3Q8C263 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ska3Q8C263 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Ska3Q8C263 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.15■□□□□ 0.5
Ska3Q8C263 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ska3Q8C263 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Ska3Q8C263 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ska3Q8C263 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ska3Q8C263 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ska3Q8C263 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.14■□□□□ 0.49
Ska3Q8C263 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ska3Q8C263 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ska3Q8C263 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ska3Q8C263 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ska3Q8C263 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ska3Q8C263 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ska3Q8C263 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ska3Q8C263 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ska3Q8C263 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 Gm43060-201ENSMUST00000200621 289 ntBASIC18.13■□□□□ 0.49
Ska3Q8C263 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.13■□□□□ 0.49
Ska3Q8C263 Gm40848-201ENSMUST00000221998 324 ntBASIC18.13■□□□□ 0.49
Ska3Q8C263 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ska3Q8C263 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ska3Q8C263 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ska3Q8C263 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ska3Q8C263 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ska3Q8C263 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ska3Q8C263 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ska3Q8C263 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ska3Q8C263 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ska3Q8C263 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ska3Q8C263 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ska3Q8C263 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ska3Q8C263 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ska3Q8C263 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ska3Q8C263 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ska3Q8C263 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ska3Q8C263 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ska3Q8C263 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ska3Q8C263 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms