Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trerf1Q8BXJ2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Serp2-204ENSMUST00000228055 705 ntBASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.22■□□□□ 0.83
Trerf1Q8BXJ2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trerf1Q8BXJ2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trerf1Q8BXJ2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trerf1Q8BXJ2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trerf1Q8BXJ2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trerf1Q8BXJ2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trerf1Q8BXJ2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trerf1Q8BXJ2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms