Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SprnQ8BWU1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.17■□□□□ 0.34
SprnQ8BWU1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.17■□□□□ 0.34
SprnQ8BWU1 Gm10399-202ENSMUST00000202768 748 ntBASIC17.17■□□□□ 0.34
SprnQ8BWU1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.17■□□□□ 0.34
SprnQ8BWU1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SprnQ8BWU1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SprnQ8BWU1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SprnQ8BWU1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SprnQ8BWU1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.15■□□□□ 0.34
SprnQ8BWU1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.15■□□□□ 0.34
SprnQ8BWU1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.15■□□□□ 0.34
SprnQ8BWU1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SprnQ8BWU1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
SprnQ8BWU1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.14■□□□□ 0.33
SprnQ8BWU1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SprnQ8BWU1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SprnQ8BWU1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.14■□□□□ 0.33
SprnQ8BWU1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.14■□□□□ 0.33
SprnQ8BWU1 Gm7417-201ENSMUST00000192950 473 ntBASIC17.14■□□□□ 0.33
SprnQ8BWU1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SprnQ8BWU1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.12■□□□□ 0.33
SprnQ8BWU1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SprnQ8BWU1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.11■□□□□ 0.33
SprnQ8BWU1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SprnQ8BWU1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SprnQ8BWU1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SprnQ8BWU1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SprnQ8BWU1 AA386476-201ENSMUST00000098781 1665 ntBASIC17.1■□□□□ 0.33
SprnQ8BWU1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SprnQ8BWU1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SprnQ8BWU1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms