Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.78■■□□□ 1.88
Usp40Q8BWR4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Nespas-201ENSMUST00000143738 1083 ntBASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Usp40Q8BWR4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
Usp40Q8BWR4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Gm13148-201ENSMUST00000118892 745 ntBASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Gm7860-201ENSMUST00000121190 879 ntBASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Usp40Q8BWR4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Usp40Q8BWR4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC26.74■■□□□ 1.87
Usp40Q8BWR4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC26.74■■□□□ 1.87
Usp40Q8BWR4 Gm6365-201ENSMUST00000054711 744 ntBASIC26.74■■□□□ 1.87
Usp40Q8BWR4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Usp40Q8BWR4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp40Q8BWR4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp40Q8BWR4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp40Q8BWR4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp40Q8BWR4 Gm12441-201ENSMUST00000121806 588 ntBASIC26.72■■□□□ 1.87
Usp40Q8BWR4 Gm4968-201ENSMUST00000071458 858 ntBASIC26.72■■□□□ 1.87
Usp40Q8BWR4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp40Q8BWR4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp40Q8BWR4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Usp40Q8BWR4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC26.7■■□□□ 1.86
Usp40Q8BWR4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC26.7■■□□□ 1.86
Usp40Q8BWR4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp40Q8BWR4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC26.7■■□□□ 1.86
Usp40Q8BWR4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp40Q8BWR4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Usp40Q8BWR4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Usp40Q8BWR4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
Usp40Q8BWR4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
Usp40Q8BWR4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Usp40Q8BWR4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Usp40Q8BWR4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Gm7290-201ENSMUST00000104990 617 ntBASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Gm12918-201ENSMUST00000120234 636 ntBASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Gm15710-201ENSMUST00000121821 636 ntBASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Usp40Q8BWR4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Gm5075-201ENSMUST00000196916 622 ntBASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp40Q8BWR4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Usp40Q8BWR4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Usp40Q8BWR4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Usp40Q8BWR4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Usp40Q8BWR4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Usp40Q8BWR4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC26.66■■□□□ 1.86
Usp40Q8BWR4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Usp40Q8BWR4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp40Q8BWR4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp40Q8BWR4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Usp40Q8BWR4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC26.65■■□□□ 1.86
Usp40Q8BWR4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC26.65■■□□□ 1.86
Usp40Q8BWR4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp40Q8BWR4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp40Q8BWR4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms