Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp43Q8BUM9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Usp43Q8BUM9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp43Q8BUM9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp43Q8BUM9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp43Q8BUM9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp43Q8BUM9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Usp43Q8BUM9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp43Q8BUM9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Usp43Q8BUM9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp43Q8BUM9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp43Q8BUM9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Usp43Q8BUM9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp43Q8BUM9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp43Q8BUM9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp43Q8BUM9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp43Q8BUM9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms