Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdk5rap1Q8BTW8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdk5rap1Q8BTW8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdk5rap1Q8BTW8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdk5rap1Q8BTW8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdk5rap1Q8BTW8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdk5rap1Q8BTW8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap1Q8BTW8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap1Q8BTW8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap1Q8BTW8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap1Q8BTW8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap1Q8BTW8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap1Q8BTW8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm29257-201ENSMUST00000186115 639 ntBASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms