Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Cpne3Q8BT60 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne3Q8BT60 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne3Q8BT60 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne3Q8BT60 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Golgb1-201ENSMUST00000023534 498 ntBASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne3Q8BT60 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.6■□□□□ 0.57
Cpne3Q8BT60 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 AA386476-201ENSMUST00000098781 1665 ntBASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne3Q8BT60 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cpne3Q8BT60 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpne3Q8BT60 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne3Q8BT60 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms