Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc43a1Q8BSM7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc43a1Q8BSM7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc43a1Q8BSM7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc43a1Q8BSM7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc43a1Q8BSM7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.58■□□□□ 0.72
Slc43a1Q8BSM7 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.58■□□□□ 0.72
Slc43a1Q8BSM7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.58■□□□□ 0.72
Slc43a1Q8BSM7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc43a1Q8BSM7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc43a1Q8BSM7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc43a1Q8BSM7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc43a1Q8BSM7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc43a1Q8BSM7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc43a1Q8BSM7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc43a1Q8BSM7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc43a1Q8BSM7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc43a1Q8BSM7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc43a1Q8BSM7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.54■□□□□ 0.72
Slc43a1Q8BSM7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc43a1Q8BSM7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc43a1Q8BSM7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.53■□□□□ 0.72
Slc43a1Q8BSM7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.53■□□□□ 0.72
Slc43a1Q8BSM7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.53■□□□□ 0.72
Slc43a1Q8BSM7 Gm27011-201ENSMUST00000182352 972 ntBASIC19.53■□□□□ 0.72
Slc43a1Q8BSM7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc43a1Q8BSM7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slc43a1Q8BSM7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Slc43a1Q8BSM7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc43a1Q8BSM7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.51■□□□□ 0.71
Slc43a1Q8BSM7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc43a1Q8BSM7 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.5■□□□□ 0.71
Slc43a1Q8BSM7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.5■□□□□ 0.71
Slc43a1Q8BSM7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms