Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cc2d1bQ8BRN9 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.37■■□□□ 1.01
Cc2d1bQ8BRN9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.37■■□□□ 1.01
Cc2d1bQ8BRN9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cc2d1bQ8BRN9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Gm43137-201ENSMUST00000198052 594 ntBASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cc2d1bQ8BRN9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cc2d1bQ8BRN9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cc2d1bQ8BRN9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cc2d1bQ8BRN9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cc2d1bQ8BRN9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cc2d1bQ8BRN9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cc2d1bQ8BRN9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cc2d1bQ8BRN9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cc2d1bQ8BRN9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.33■■□□□ 1.01
Cc2d1bQ8BRN9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cc2d1bQ8BRN9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cc2d1bQ8BRN9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cc2d1bQ8BRN9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cc2d1bQ8BRN9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cc2d1bQ8BRN9 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.33■■□□□ 1
Cc2d1bQ8BRN9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cc2d1bQ8BRN9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.32■■□□□ 1
Cc2d1bQ8BRN9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cc2d1bQ8BRN9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cc2d1bQ8BRN9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cc2d1bQ8BRN9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Spcs1-204ENSMUST00000226782 949 ntBASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Cc2d1bQ8BRN9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cc2d1bQ8BRN9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.27■■□□□ 1
Cc2d1bQ8BRN9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cc2d1bQ8BRN9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cc2d1bQ8BRN9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cc2d1bQ8BRN9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cc2d1bQ8BRN9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cc2d1bQ8BRN9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cc2d1bQ8BRN9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cc2d1bQ8BRN9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cc2d1bQ8BRN9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cc2d1bQ8BRN9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cc2d1bQ8BRN9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms