Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab11fip4Q8BQP8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rab11fip4Q8BQP8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rab11fip4Q8BQP8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rab11fip4Q8BQP8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Rab11fip4Q8BQP8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab11fip4Q8BQP8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab11fip4Q8BQP8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab11fip4Q8BQP8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.41■■□□□ 1.02
Rab11fip4Q8BQP8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.41■■□□□ 1.02
Rab11fip4Q8BQP8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rab11fip4Q8BQP8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rab11fip4Q8BQP8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rab11fip4Q8BQP8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Rab11fip4Q8BQP8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rab11fip4Q8BQP8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rab11fip4Q8BQP8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rab11fip4Q8BQP8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rab11fip4Q8BQP8 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.39■■□□□ 1.02
Rab11fip4Q8BQP8 Gm40848-201ENSMUST00000221998 324 ntBASIC21.39■■□□□ 1.01
Rab11fip4Q8BQP8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab11fip4Q8BQP8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab11fip4Q8BQP8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab11fip4Q8BQP8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab11fip4Q8BQP8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rab11fip4Q8BQP8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab11fip4Q8BQP8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Rab11fip4Q8BQP8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.38■■□□□ 1.01
Rab11fip4Q8BQP8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab11fip4Q8BQP8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Rab11fip4Q8BQP8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Rab11fip4Q8BQP8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.37■■□□□ 1.01
Rab11fip4Q8BQP8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab11fip4Q8BQP8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rab11fip4Q8BQP8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab11fip4Q8BQP8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab11fip4Q8BQP8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Rab11fip4Q8BQP8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rab11fip4Q8BQP8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rab11fip4Q8BQP8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rab11fip4Q8BQP8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.36■■□□□ 1.01
Rab11fip4Q8BQP8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab11fip4Q8BQP8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Smad6-203ENSMUST00000179458 273 ntBASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rab11fip4Q8BQP8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Gm10493-201ENSMUST00000097270 612 ntBASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab11fip4Q8BQP8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab11fip4Q8BQP8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.33■■□□□ 1.01
Rab11fip4Q8BQP8 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.33■■□□□ 1.01
Rab11fip4Q8BQP8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rab11fip4Q8BQP8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.32■■□□□ 1
Rab11fip4Q8BQP8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms