Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Gm43137-201ENSMUST00000198052 594 ntBASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh20Q8BIZ0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh20Q8BIZ0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh20Q8BIZ0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh20Q8BIZ0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh20Q8BIZ0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh20Q8BIZ0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdh20Q8BIZ0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh20Q8BIZ0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh20Q8BIZ0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh20Q8BIZ0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh20Q8BIZ0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh20Q8BIZ0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms