Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf38Q8BI21 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf38Q8BI21 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf38Q8BI21 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf38Q8BI21 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rnf38Q8BI21 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.64■□□□□ 0.57
Rnf38Q8BI21 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf38Q8BI21 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rnf38Q8BI21 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf38Q8BI21 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.64■□□□□ 0.57
Rnf38Q8BI21 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Rnf38Q8BI21 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.63■□□□□ 0.57
Rnf38Q8BI21 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf38Q8BI21 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf38Q8BI21 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf38Q8BI21 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf38Q8BI21 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf38Q8BI21 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.58■□□□□ 0.57
Rnf38Q8BI21 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf38Q8BI21 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf38Q8BI21 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Rnf38Q8BI21 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms