Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn3Q8BHH8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn3Q8BHH8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn3Q8BHH8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn3Q8BHH8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn3Q8BHH8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clrn3Q8BHH8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.1■□□□□ 0.49
Clrn3Q8BHH8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clrn3Q8BHH8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Clrn3Q8BHH8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn3Q8BHH8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn3Q8BHH8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn3Q8BHH8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn3Q8BHH8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clrn3Q8BHH8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.08■□□□□ 0.48
Clrn3Q8BHH8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn3Q8BHH8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn3Q8BHH8 Gm27454-201ENSMUST00000185090 204 ntBASIC18.07■□□□□ 0.48
Clrn3Q8BHH8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clrn3Q8BHH8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn3Q8BHH8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clrn3Q8BHH8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clrn3Q8BHH8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clrn3Q8BHH8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clrn3Q8BHH8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clrn3Q8BHH8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clrn3Q8BHH8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms