Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nod1Q8BHB0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nod1Q8BHB0 AA386476-201ENSMUST00000098781 1665 ntBASIC20.39■□□□□ 0.86
Nod1Q8BHB0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nod1Q8BHB0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nod1Q8BHB0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nod1Q8BHB0 Nespas-201ENSMUST00000143738 1083 ntBASIC20.39■□□□□ 0.85
Nod1Q8BHB0 Gm6365-201ENSMUST00000054711 744 ntBASIC20.39■□□□□ 0.85
Nod1Q8BHB0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.39■□□□□ 0.85
Nod1Q8BHB0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nod1Q8BHB0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nod1Q8BHB0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nod1Q8BHB0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Gm10653-202ENSMUST00000139570 835 ntBASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nod1Q8BHB0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Gm6420-201ENSMUST00000193885 723 ntBASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Gm5408-201ENSMUST00000197998 747 ntBASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.36■□□□□ 0.85
Nod1Q8BHB0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nod1Q8BHB0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nod1Q8BHB0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Nod1Q8BHB0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.35■□□□□ 0.85
Nod1Q8BHB0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nod1Q8BHB0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nod1Q8BHB0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.35■□□□□ 0.85
Nod1Q8BHB0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Gm5075-201ENSMUST00000196916 622 ntBASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nod1Q8BHB0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nod1Q8BHB0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.33■□□□□ 0.84
Nod1Q8BHB0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nod1Q8BHB0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nod1Q8BHB0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nod1Q8BHB0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nod1Q8BHB0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nod1Q8BHB0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nod1Q8BHB0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nod1Q8BHB0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.32■□□□□ 0.84
Nod1Q8BHB0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nod1Q8BHB0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.32■□□□□ 0.84
Nod1Q8BHB0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nod1Q8BHB0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms