Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Gm43173-201ENSMUST00000202246 593 ntBASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Depdc1bQ8BH88 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Depdc1bQ8BH88 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Depdc1bQ8BH88 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Depdc1bQ8BH88 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.01■□□□□ 0.95
Depdc1bQ8BH88 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Depdc1bQ8BH88 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Depdc1bQ8BH88 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Depdc1bQ8BH88 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21■□□□□ 0.95
Depdc1bQ8BH88 Gm7160-202ENSMUST00000188519 1027 ntBASIC21■□□□□ 0.95
Depdc1bQ8BH88 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Depdc1bQ8BH88 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Depdc1bQ8BH88 Gm43545-201ENSMUST00000196765 2779 ntBASIC21■□□□□ 0.95
Depdc1bQ8BH88 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Depdc1bQ8BH88 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Depdc1bQ8BH88 Gm12251-201ENSMUST00000117893 792 ntBASIC20.99■□□□□ 0.95
Depdc1bQ8BH88 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.99■□□□□ 0.95
Depdc1bQ8BH88 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Depdc1bQ8BH88 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Depdc1bQ8BH88 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Depdc1bQ8BH88 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Depdc1bQ8BH88 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Depdc1bQ8BH88 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Spcs1-204ENSMUST00000226782 949 ntBASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Depdc1bQ8BH88 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Depdc1bQ8BH88 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1bQ8BH88 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1bQ8BH88 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.95■□□□□ 0.94
Depdc1bQ8BH88 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1bQ8BH88 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Depdc1bQ8BH88 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Depdc1bQ8BH88 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1bQ8BH88 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.93■□□□□ 0.94
Depdc1bQ8BH88 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1bQ8BH88 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1bQ8BH88 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Depdc1bQ8BH88 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms