Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nucks1Q80XU3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nucks1Q80XU3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nucks1Q80XU3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Gm9847-201ENSMUST00000052528 599 ntBASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nucks1Q80XU3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nucks1Q80XU3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nucks1Q80XU3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.58■□□□□ 0.89
Nucks1Q80XU3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nucks1Q80XU3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms