Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nrde2Q80XC6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.6■□□□□ 0.73
Nrde2Q80XC6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nrde2Q80XC6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.6■□□□□ 0.73
Nrde2Q80XC6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nrde2Q80XC6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nrde2Q80XC6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Mir5133-201ENSMUST00000174955 77 ntBASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nrde2Q80XC6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nrde2Q80XC6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nrde2Q80XC6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Nrde2Q80XC6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nrde2Q80XC6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nrde2Q80XC6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nrde2Q80XC6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nrde2Q80XC6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nrde2Q80XC6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nrde2Q80XC6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nrde2Q80XC6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Gm12441-201ENSMUST00000121806 588 ntBASIC19.57■□□□□ 0.72
Nrde2Q80XC6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nrde2Q80XC6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nrde2Q80XC6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nrde2Q80XC6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.56■□□□□ 0.72
Nrde2Q80XC6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nrde2Q80XC6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Nespas-201ENSMUST00000143738 1083 ntBASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nrde2Q80XC6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nrde2Q80XC6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nrde2Q80XC6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nrde2Q80XC6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nrde2Q80XC6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Nrde2Q80XC6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nrde2Q80XC6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nrde2Q80XC6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms