Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim36Q80WG7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim36Q80WG7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.63■□□□□ 0.57
Trim36Q80WG7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim36Q80WG7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim36Q80WG7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim36Q80WG7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim36Q80WG7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim36Q80WG7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Serp2-204ENSMUST00000228055 705 ntBASIC18.6■□□□□ 0.57
Trim36Q80WG7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim36Q80WG7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim36Q80WG7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim36Q80WG7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim36Q80WG7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim36Q80WG7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim36Q80WG7 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.58■□□□□ 0.56
Trim36Q80WG7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim36Q80WG7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim36Q80WG7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trim36Q80WG7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim36Q80WG7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trim36Q80WG7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim36Q80WG7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim36Q80WG7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trim36Q80WG7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.57■□□□□ 0.56
Trim36Q80WG7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim36Q80WG7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim36Q80WG7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.56■□□□□ 0.56
Trim36Q80WG7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms