Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Gm4968-201ENSMUST00000071458 858 ntBASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3tc2Q80VA5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc2Q80VA5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc2Q80VA5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.09■□□□□ 0.97
Sh3tc2Q80VA5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc2Q80VA5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc2Q80VA5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Sh3tc2Q80VA5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3tc2Q80VA5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Sh3tc2Q80VA5 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.08■□□□□ 0.97
Sh3tc2Q80VA5 Gm22240-201ENSMUST00000175225 82 ntBASIC21.08■□□□□ 0.97
Sh3tc2Q80VA5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.08■□□□□ 0.97
Sh3tc2Q80VA5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc2Q80VA5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc2Q80VA5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc2Q80VA5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.07■□□□□ 0.96
Sh3tc2Q80VA5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc2Q80VA5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc2Q80VA5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc2Q80VA5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc2Q80VA5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc2Q80VA5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc2Q80VA5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Sh3tc2Q80VA5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.05■□□□□ 0.96
Sh3tc2Q80VA5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc2Q80VA5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc2Q80VA5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc2Q80VA5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sh3tc2Q80VA5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Gm12527-201ENSMUST00000117967 564 ntBASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Gm20760-201ENSMUST00000179197 648 ntBASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Gm10252-201ENSMUST00000209541 832 ntBASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sh3tc2Q80VA5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc2Q80VA5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3tc2Q80VA5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3tc2Q80VA5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3tc2Q80VA5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3tc2Q80VA5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc2Q80VA5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc2Q80VA5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.01■□□□□ 0.95
Sh3tc2Q80VA5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3tc2Q80VA5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms