Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm4Q80V63 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.05■□□□□ 0.8
Prdm4Q80V63 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm4Q80V63 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm4Q80V63 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prdm4Q80V63 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm4Q80V63 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm4Q80V63 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Prdm4Q80V63 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm4Q80V63 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm4Q80V63 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Prdm4Q80V63 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm4Q80V63 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prdm4Q80V63 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Prdm4Q80V63 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prdm4Q80V63 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.03■□□□□ 0.8
Prdm4Q80V63 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.03■□□□□ 0.8
Prdm4Q80V63 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.03■□□□□ 0.8
Prdm4Q80V63 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.03■□□□□ 0.8
Prdm4Q80V63 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.03■□□□□ 0.8
Prdm4Q80V63 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prdm4Q80V63 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Prdm4Q80V63 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Prdm4Q80V63 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prdm4Q80V63 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.02■□□□□ 0.8
Prdm4Q80V63 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prdm4Q80V63 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Prdm4Q80V63 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm4Q80V63 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prdm4Q80V63 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prdm4Q80V63 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm4Q80V63 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm4Q80V63 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prdm4Q80V63 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm4Q80V63 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20■□□□□ 0.79
Prdm4Q80V63 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20■□□□□ 0.79
Prdm4Q80V63 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm4Q80V63 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Prdm4Q80V63 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm4Q80V63 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm4Q80V63 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.99■□□□□ 0.79
Prdm4Q80V63 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Prdm4Q80V63 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm4Q80V63 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm4Q80V63 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prdm4Q80V63 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.99■□□□□ 0.79
Prdm4Q80V63 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm4Q80V63 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm4Q80V63 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm4Q80V63 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm4Q80V63 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm4Q80V63 Gm14117-201ENSMUST00000122417 843 ntBASIC19.98■□□□□ 0.79
Prdm4Q80V63 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.98■□□□□ 0.79
Prdm4Q80V63 Gm45102-201ENSMUST00000207427 857 ntBASIC19.98■□□□□ 0.79
Prdm4Q80V63 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prdm4Q80V63 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.98■□□□□ 0.79
Prdm4Q80V63 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Gm40881-201ENSMUST00000223397 166 ntBASIC19.97■□□□□ 0.79
Prdm4Q80V63 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prdm4Q80V63 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prdm4Q80V63 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Prdm4Q80V63 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms