Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm7514-201ENSMUST00000209475 934 ntBASIC21.23■□□□□ 0.99
Ush1gQ80T11 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ush1gQ80T11 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.22■□□□□ 0.99
Ush1gQ80T11 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.22■□□□□ 0.99
Ush1gQ80T11 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ush1gQ80T11 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.22■□□□□ 0.99
Ush1gQ80T11 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.21■□□□□ 0.99
Ush1gQ80T11 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ush1gQ80T11 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ush1gQ80T11 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ush1gQ80T11 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ush1gQ80T11 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ush1gQ80T11 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.21■□□□□ 0.99
Ush1gQ80T11 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ush1gQ80T11 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ush1gQ80T11 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ush1gQ80T11 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ush1gQ80T11 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ush1gQ80T11 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ush1gQ80T11 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ush1gQ80T11 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ush1gQ80T11 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ush1gQ80T11 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ush1gQ80T11 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ush1gQ80T11 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.19■□□□□ 0.98
Ush1gQ80T11 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ush1gQ80T11 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ush1gQ80T11 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Gm12441-201ENSMUST00000121806 588 ntBASIC21.18■□□□□ 0.98
Ush1gQ80T11 Mir5133-201ENSMUST00000174955 77 ntBASIC21.18■□□□□ 0.98
Ush1gQ80T11 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ush1gQ80T11 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.17■□□□□ 0.98
Ush1gQ80T11 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.17■□□□□ 0.98
Ush1gQ80T11 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ush1gQ80T11 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ush1gQ80T11 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ush1gQ80T11 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ush1gQ80T11 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ush1gQ80T11 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ush1gQ80T11 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.16■□□□□ 0.98
Ush1gQ80T11 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.16■□□□□ 0.98
Ush1gQ80T11 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.16■□□□□ 0.98
Ush1gQ80T11 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ush1gQ80T11 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ush1gQ80T11 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms