Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf38bQ80SY5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38bQ80SY5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38bQ80SY5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.16■□□□□ 0.82
Prpf38bQ80SY5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38bQ80SY5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Prpf38bQ80SY5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf38bQ80SY5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38bQ80SY5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38bQ80SY5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.15■□□□□ 0.82
Prpf38bQ80SY5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38bQ80SY5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38bQ80SY5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf38bQ80SY5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Gm13234-201ENSMUST00000120010 747 ntBASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Prpf38bQ80SY5 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf38bQ80SY5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf38bQ80SY5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Gm13168-201ENSMUST00000121771 632 ntBASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Gm10812-201ENSMUST00000099864 546 ntBASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf38bQ80SY5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Gm9988-201ENSMUST00000069786 435 ntBASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf38bQ80SY5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.09■□□□□ 0.81
Prpf38bQ80SY5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Gm13836-201ENSMUST00000121159 501 ntBASIC20.08■□□□□ 0.81
Prpf38bQ80SY5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms