Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Gm37179-201ENSMUST00000194862 823 ntBASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh8Q7TSK3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh8Q7TSK3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pcdh8Q7TSK3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh8Q7TSK3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh8Q7TSK3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh8Q7TSK3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh8Q7TSK3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh8Q7TSK3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh8Q7TSK3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh8Q7TSK3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Reep4-203ENSMUST00000226563 1444 ntBASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdh8Q7TSK3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms