Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Kdm1aQ6ZQ88 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 Gm43137-201ENSMUST00000198052 594 ntBASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.36■■□□□ 1.01
Kdm1aQ6ZQ88 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Gm13241-201ENSMUST00000094493 780 ntBASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Kdm1aQ6ZQ88 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Spcs1-204ENSMUST00000226782 949 ntBASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Kdm1aQ6ZQ88 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.33■■□□□ 1.01
Kdm1aQ6ZQ88 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Kdm1aQ6ZQ88 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Kdm1aQ6ZQ88 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Kdm1aQ6ZQ88 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kdm1aQ6ZQ88 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 Gm21956-201ENSMUST00000179946 522 ntBASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kdm1aQ6ZQ88 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm1aQ6ZQ88 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm1aQ6ZQ88 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm1aQ6ZQ88 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.3■■□□□ 1
Kdm1aQ6ZQ88 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kdm1aQ6ZQ88 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.3■■□□□ 1
Kdm1aQ6ZQ88 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Kdm1aQ6ZQ88 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms