Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rif1Q6PR54 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rif1Q6PR54 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Gm6345-202ENSMUST00000180900 204 ntBASIC16.4■□□□□ 0.22
Rif1Q6PR54 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.4■□□□□ 0.22
Rif1Q6PR54 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.4■□□□□ 0.22
Rif1Q6PR54 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rif1Q6PR54 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rif1Q6PR54 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rif1Q6PR54 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.39■□□□□ 0.21
Rif1Q6PR54 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rif1Q6PR54 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rif1Q6PR54 Gm10013-201ENSMUST00000106074 672 ntBASIC16.38■□□□□ 0.21
Rif1Q6PR54 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rif1Q6PR54 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.38■□□□□ 0.21
Rif1Q6PR54 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rif1Q6PR54 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rif1Q6PR54 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rif1Q6PR54 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.37■□□□□ 0.21
Rif1Q6PR54 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.37■□□□□ 0.21
Rif1Q6PR54 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rif1Q6PR54 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rif1Q6PR54 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rif1Q6PR54 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rif1Q6PR54 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rif1Q6PR54 Gm33142-201ENSMUST00000193913 867 ntBASIC16.35■□□□□ 0.21
Rif1Q6PR54 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.35■□□□□ 0.21
Rif1Q6PR54 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rif1Q6PR54 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rif1Q6PR54 Gm43514-201ENSMUST00000198852 424 ntBASIC16.35■□□□□ 0.21
Rif1Q6PR54 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.35■□□□□ 0.21
Rif1Q6PR54 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rif1Q6PR54 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rif1Q6PR54 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Gm7889-201ENSMUST00000185591 958 ntBASIC16.34■□□□□ 0.21
Rif1Q6PR54 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Gm14859-201ENSMUST00000117752 357 ntBASIC16.34■□□□□ 0.21
Rif1Q6PR54 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.34■□□□□ 0.21
Rif1Q6PR54 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rif1Q6PR54 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rif1Q6PR54 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rif1Q6PR54 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.33■□□□□ 0.2
Rif1Q6PR54 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms