Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Chd4Q6PDQ2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Chd4Q6PDQ2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Chd4Q6PDQ2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Chd4Q6PDQ2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Chd4Q6PDQ2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Chd4Q6PDQ2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Chd4Q6PDQ2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC25.7■■□□□ 1.71
Chd4Q6PDQ2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Chd4Q6PDQ2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Chd4Q6PDQ2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Chd4Q6PDQ2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Chd4Q6PDQ2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Chd4Q6PDQ2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC25.7■■□□□ 1.7
Chd4Q6PDQ2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC25.69■■□□□ 1.7
Chd4Q6PDQ2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Chd4Q6PDQ2 Gm6802-201ENSMUST00000167843 1983 ntBASIC25.69■■□□□ 1.7
Chd4Q6PDQ2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Chd4Q6PDQ2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Chd4Q6PDQ2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Chd4Q6PDQ2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Chd4Q6PDQ2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
Chd4Q6PDQ2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Chd4Q6PDQ2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Chd4Q6PDQ2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Chd4Q6PDQ2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC25.67■■□□□ 1.7
Chd4Q6PDQ2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Chd4Q6PDQ2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chd4Q6PDQ2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Chd4Q6PDQ2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Chd4Q6PDQ2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chd4Q6PDQ2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Chd4Q6PDQ2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Chd4Q6PDQ2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Chd4Q6PDQ2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Chd4Q6PDQ2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Chd4Q6PDQ2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
Chd4Q6PDQ2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Chd4Q6PDQ2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Chd4Q6PDQ2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chd4Q6PDQ2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Chd4Q6PDQ2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chd4Q6PDQ2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Chd4Q6PDQ2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Chd4Q6PDQ2 Gm20049-201ENSMUST00000219950 730 ntBASIC25.63■■□□□ 1.69
Chd4Q6PDQ2 Gm20100-201ENSMUST00000209418 2272 ntBASIC25.62■■□□□ 1.69
Chd4Q6PDQ2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Chd4Q6PDQ2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Chd4Q6PDQ2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Chd4Q6PDQ2 Gm37563-201ENSMUST00000192580 1513 ntBASIC25.61■■□□□ 1.69
Chd4Q6PDQ2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Chd4Q6PDQ2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Chd4Q6PDQ2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC25.61■■□□□ 1.69
Chd4Q6PDQ2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC25.61■■□□□ 1.69
Chd4Q6PDQ2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 Gm27032-201ENSMUST00000183124 1116 ntBASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 Gm37856-201ENSMUST00000191634 999 ntBASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Chd4Q6PDQ2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC25.59■■□□□ 1.69
Chd4Q6PDQ2 Gm20760-201ENSMUST00000179197 648 ntBASIC25.59■■□□□ 1.69
Chd4Q6PDQ2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Chd4Q6PDQ2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Chd4Q6PDQ2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Chd4Q6PDQ2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Chd4Q6PDQ2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Chd4Q6PDQ2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC25.58■■□□□ 1.69
Chd4Q6PDQ2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC25.58■■□□□ 1.69
Chd4Q6PDQ2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms