Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Smad6-203ENSMUST00000179458 273 ntBASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Gm8493-201ENSMUST00000196881 489 ntBASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac4Q6NZM9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac4Q6NZM9 Iqck-206ENSMUST00000208658 2891 ntBASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Gm45417-201ENSMUST00000209533 758 ntBASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hdac4Q6NZM9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hdac4Q6NZM9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 Gm6139-201ENSMUST00000079261 882 ntBASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hdac4Q6NZM9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac4Q6NZM9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.67■■□□□ 1.06
Hdac4Q6NZM9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac4Q6NZM9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac4Q6NZM9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hdac4Q6NZM9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac4Q6NZM9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.66■■□□□ 1.06
Hdac4Q6NZM9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.66■■□□□ 1.06
Hdac4Q6NZM9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac4Q6NZM9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac4Q6NZM9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac4Q6NZM9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hdac4Q6NZM9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Hdac4Q6NZM9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hdac4Q6NZM9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Hdac4Q6NZM9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hdac4Q6NZM9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
Hdac4Q6NZM9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Gm11421-201ENSMUST00000122124 294 ntBASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hdac4Q6NZM9 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hdac4Q6NZM9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac4Q6NZM9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac4Q6NZM9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Hdac4Q6NZM9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hdac4Q6NZM9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms